In chemistry, a molecule is generally an aggregate of at least two atoms in a definite arrangement held together by special forces. Generally, a molecule is considered the smallest particle of a pure chemical substance that still retains its composition and chemical properties.Molecule Definition Some pure chemical substances existing as liquids or solids (such as metals, molten salts, crystals, etc.), for which such a definition may not always be possible, are best understood as being composed of atoms, not recognizable molecules. In the molecular sciences, a molecule is a sufficiently stable, electrically neutral entity composed of two or more atoms.IUPAC Defintion of Molecule The concept of "monatomic molecule", i.e. a single-atom as found in noble gases, is used almost exclusively in the kinetic theory of gases.* Polyatomic ions may sometimes be usefully thought of as electrically-charged molecules.
A peculiar use of the term molecular is as a synonym to covalent, which arises from the fact that, unlike molecular covalent compounds, ionic compounds do not yield well-defined smallest particles that would be consistent with the definition above. No typical "smallest particle" can be defined for covalent crystals, or network solids, which are composed of repeating unit cells that extend indefinitely either in a plane (such as in graphite) or three-dimensionally (such as in diamond). Thus, while all gases exist as molecules, not all solids and liquids do. In fact, many of the most familiar substances in ordinary experience, such as rocks, crystals, and metals, are composed of atoms, but are not made of molecules.
In a molecule, the atoms are joined by shared pairs of electrons in a chemical bond. It may consist of atoms of the same chemical element, as with oxygen (O2), or of different elements, as with water (H2O).
The empirical formula of a molecule is the simplest integer ratio of the chemical elements that constitute the compound. For example, in their pure forms, water is always composed of a 2:1 ratio of hydrogen to oxygen, and ethyl alcohol or ethanol is always composed of carbon, hydrogen, and oxygen in a 2:6:1 ratio. However, this does not determine the kind of molecule uniquely - dimethyl ether has the same ratio as ethanol, for instance. Molecules with the same atoms in different arrangements are called isomers. The empirical formula is often the same as the molecular formula but not always. For example the molecule acetylene has molecular formula C2H2, but the simplest integer ratio of elements is CH.
The chemical formula reflects the exact number of atoms that compose a molecule.
The molecular mass can be calculated from the chemical formula and is expressed in conventional units equal to 1/12 from the mass of a 12C isotope atom. For network solids, the term formula unit is used in stoichiometric calculations.
Molecules have fixed equilibrium geometries—bond lengths and angles— about which they continuously oscillate through vibrational and rotational motions. A pure substance is composed of molecules with the same average geometrical structure. The chemical formula and the structure of a molecule are the two important factors that determine its properties, particularly its reactivity. Isomers share a chemical formula but normally have very different properties because of their different structures. Stereoisomers, a particular type of isomers, may have very similar physico-chemical properties and at the same time very different biochemical activities.
Molecular spectroscopy deals with the response (spectrum) of molecules interacting with probing signals of known energy (or frequency, according to Planck's formula). Scattering theory provides the theoretical background for spectroscopy.
The probing signal used in spectroscopy can be an electromagnetic wave or a beam of particles (electrons, positrons, etc.) The molecular response can consist of signal absorption (absorption spectroscopy), the emission of another signal (emission spectroscopy), fragmentation, or chemical changes.
Spectroscopy is recognized as a powerful tool in investigating the microscopic properties of molecules, in particular their energy levels. In order to extract maximum microscopic information from experimental results, spectroscopy is often coupled with chemical computations.
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